Package: admiral 1.1.1.9008
![](https://github.com/pharmaverse/admiral/raw/HEAD/man/figures/logo.png)
admiral: ADaM in R Asset Library
A toolbox for programming Clinical Data Interchange Standards Consortium (CDISC) compliant Analysis Data Model (ADaM) datasets in R. ADaM datasets are a mandatory part of any New Drug or Biologics License Application submitted to the United States Food and Drug Administration (FDA). Analysis derivations are implemented in accordance with the "Analysis Data Model Implementation Guide" (CDISC Analysis Data Model Team, 2021, <https://www.cdisc.org/standards/foundational/adam>).
Authors:
admiral_1.1.1.9008.tar.gz
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admiral_1.1.1.9008.tgz(r-4.4-any)admiral_1.1.1.9008.tgz(r-4.3-any)
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admiral.pdf |admiral.html✨
admiral/json (API)
NEWS
# Install 'admiral' in R: |
install.packages('admiral', repos = c('https://pharmaverse.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/pharmaverse/admiral/issues
- admiral_adlb - Lab Analysis Dataset
- admiral_adsl - Subject Level Analysis Dataset
- atoxgr_criteria_ctcv4 - Metadata Holding Grading Criteria for NCI-CTCAEv4
- atoxgr_criteria_ctcv5 - Metadata Holding Grading Criteria for NCI-CTCAEv5
- atoxgr_criteria_daids - Metadata Holding Grading Criteria for DAIDs
- ex_single - Single Dose Exposure Dataset
- example_qs - Example 'QS' Dataset
- queries - Queries Dataset
- queries_mh - Queries MH Dataset
cdiscclinical-trialsopen-source
Last updated 5 days agofrom:0beb82dd82. Checks:OK: 1 NOTE: 6. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Sep 03 2024 |
R-4.5-win | NOTE | Sep 03 2024 |
R-4.5-linux | NOTE | Sep 03 2024 |
R-4.4-win | NOTE | Sep 03 2024 |
R-4.4-mac | NOTE | Sep 03 2024 |
R-4.3-win | NOTE | Sep 03 2024 |
R-4.3-mac | NOTE | Sep 03 2024 |
Exports:%>%ae_eventae_gr1_eventae_gr2_eventae_gr3_eventae_gr35_eventae_gr4_eventae_gr5_eventae_ser_eventae_sev_eventae_wd_eventbasket_selectcall_derivationcall_user_funcensor_sourcechr2varscompute_age_yearscompute_bmicompute_bsacompute_dtfcompute_durationcompute_egfrcompute_framinghamcompute_mapcompute_qtccompute_qual_imputationcompute_qual_imputation_deccompute_rrcompute_scalecompute_tmfconsolidate_metadataconvert_blanks_to_naconvert_date_to_dtmconvert_dtc_to_dtconvert_dtc_to_dtmconvert_na_to_blankscount_valscountry_code_lookupcreate_period_datasetcreate_query_datacreate_single_dose_datasetdate_sourcedeath_eventdefault_qtc_paramcdderivation_slicederive_basetype_recordsderive_expected_recordsderive_extreme_eventderive_extreme_recordsderive_locf_recordsderive_param_bmiderive_param_bsaderive_param_computedderive_param_doseintderive_param_exist_flagderive_param_exposurederive_param_extreme_recordderive_param_framinghamderive_param_mapderive_param_qtcderive_param_rrderive_param_ttederive_param_wbc_absderive_summary_recordsderive_var_age_yearsderive_var_analysis_ratioderive_var_anrindderive_var_atoxgrderive_var_atoxgr_dirderive_var_basederive_var_chgderive_var_dthcausderive_var_extreme_dtderive_var_extreme_dtmderive_var_extreme_flagderive_var_joined_exist_flagderive_var_merged_ef_msrcderive_var_merged_exist_flagderive_var_merged_summaryderive_var_obs_numberderive_var_ontrtflderive_var_pchgderive_var_relative_flagderive_var_shiftderive_var_trtdurdderive_var_trtemflderive_vars_aagederive_vars_atcderive_vars_computedderive_vars_crit_flagderive_vars_dtderive_vars_dtmderive_vars_dtm_to_dtderive_vars_dtm_to_tmderive_vars_durationderive_vars_dyderive_vars_extreme_eventderive_vars_joinedderive_vars_mergedderive_vars_merged_lookupderive_vars_periodderive_vars_queryderive_vars_transposeddescdose_freq_lookupdthcaus_sourceeventevent_joinedevent_sourceexprsextract_duplicate_recordsextract_unitfilter_existfilter_extremefilter_joinedfilter_not_existfilter_relativeflag_eventget_admiral_optionget_duplicates_datasetget_flagged_recordsget_many_to_one_datasetget_not_mappedget_one_to_many_datasetget_summary_recordsget_vars_queryimpute_dtc_dtimpute_dtc_dtmlastalive_censorlist_all_templateslist_tte_source_objectsmax_condmin_condnegate_varsparamsprint_named_listqueryrecords_sourcerestrict_derivationset_admiral_optionssignal_duplicate_recordsslice_derivationuse_ad_templateyn_to_numeric
Dependencies:admiraldevclicpp11dplyrfansigenericsgluehmslifecyclelubridatemagrittrpillarpkgconfigpurrrR6rlangstringistringrtibbletidyrtidyselecttimechangeutf8vctrswithr
Creating a BDS Exposure ADaM
Rendered frombds_exposure.Rmd
usingknitr::rmarkdown
on Sep 03 2024.Last update: 2024-02-05
Started: 2021-09-08
Creating a BDS Finding ADaM
Rendered frombds_finding.Rmd
usingknitr::rmarkdown
on Sep 03 2024.Last update: 2024-07-09
Started: 2021-07-05
Creating a BDS Time-to-Event ADaM
Rendered frombds_tte.Rmd
usingknitr::rmarkdown
on Sep 03 2024.Last update: 2024-03-06
Started: 2021-11-17
Creating a PK NCA or Population PK ADaM
Rendered frompk_adnca.Rmd
usingknitr::rmarkdown
on Sep 03 2024.Last update: 2024-09-03
Started: 2023-03-07
Creating ADSL
Rendered fromadsl.Rmd
usingknitr::rmarkdown
on Sep 03 2024.Last update: 2024-06-06
Started: 2021-07-05
Creating an OCCDS ADaM
Rendered fromoccds.Rmd
usingknitr::rmarkdown
on Sep 03 2024.Last update: 2024-01-26
Started: 2021-07-05
Creating Questionnaire ADaMs
Rendered fromquestionnaires.Rmd
usingknitr::rmarkdown
on Sep 03 2024.Last update: 2024-09-03
Started: 2023-03-07
Date and Time Imputation
Rendered fromimputation.Rmd
usingknitr::rmarkdown
on Sep 03 2024.Last update: 2023-09-11
Started: 2021-09-08
Generic Derivations
Rendered fromgeneric.Rmd
usingknitr::rmarkdown
on Sep 03 2024.Last update: 2023-11-30
Started: 2022-12-06
Higher Order Functions
Rendered fromhigher_order.Rmd
usingknitr::rmarkdown
on Sep 03 2024.Last update: 2023-09-11
Started: 2022-09-06
Hy's Law Implementation
Rendered fromhys_law.Rmd
usingknitr::rmarkdown
on Sep 03 2024.Last update: 2024-07-09
Started: 2023-03-07
Lab Grading
Rendered fromlab_grading.Rmd
usingknitr::rmarkdown
on Sep 03 2024.Last update: 2024-07-09
Started: 2022-09-06
Programming Concepts and Conventions
Rendered fromconcepts_conventions.Rmd
usingknitr::rmarkdown
on Sep 03 2024.Last update: 2024-06-07
Started: 2024-05-16
Queries Dataset Documentation
Rendered fromqueries_dataset.Rmd
usingknitr::rmarkdown
on Sep 03 2024.Last update: 2023-12-04
Started: 2021-11-17
Visit and Period Variables
Rendered fromvisits_periods.Rmd
usingknitr::rmarkdown
on Sep 03 2024.Last update: 2024-05-21
Started: 2022-12-06