Package: teal.osprey 0.1.16.9025

Nina Qi

teal.osprey: 'teal' Modules for TLG Functions in Osprey

Community efforts to collect 'teal' modules for TLGs defined in 'osprey' package. Enables 'teal' app developers to create 'shiny' applications with a use of 'osprey' analysis functions.

Authors:Nina Qi [aut, cre], Dawid Kaledkowski [aut], Chendi Liao [aut], Liming Li [aut], Konrad Pagacz [aut], Molly He [ctb], Carolyn Zhang [ctb], Tina Cho [ctb], F. Hoffmann-La Roche AG [cph, fnd]

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teal.osprey.pdf |teal.osprey.html✨
teal.osprey/json (API)
NEWS

# Install 'teal.osprey' in R:

install.packages('teal.osprey', repos = c('https://pharmaverse.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/insightsengineering/teal.osprey/issues

On CRAN:

modules nest

14 exports 5 stars 2.89 score 167 dependencies 1 scripts

Last updated 9 days agofrom:99ce029ab4. Checks:OK: 5 NOTE: 2. Indexed: no.

Target	Result	Date
Doc / Vignettes	OK	Aug 29 2024
R-4.5-win	NOTE	Aug 29 2024
R-4.5-linux	NOTE	Aug 30 2024
R-4.4-win	OK	Aug 30 2024
R-4.4-mac	OK	Aug 30 2024
R-4.3-win	OK	Aug 29 2024
R-4.3-mac	OK	Aug 30 2024

Exports:label_aevar plot_decorate_output quick_filter srv_g_decorate tm_g_ae_oview tm_g_ae_sub tm_g_butterfly tm_g_events_term_id tm_g_heat_bygrade tm_g_patient_profile tm_g_spiderplot tm_g_swimlane tm_g_waterfall ui_g_decorate

Dependencies:abind anytime askpass backports base64enc BH boot broom bslib cachem car carData cellranger checkmate class cli codetools colorspace commonmark cowplot cpp11 crayon crosstalk curl data.table Deriv DescTools digest doBy dplyr e1071 emmeans estimability evaluate Exact expm fansi farver fastmap flextable fontawesome fontBitstreamVera fontLiberation fontquiver forcats formatters fs future gdtools generics ggplot2 gld globals glue gridExtra gtable highr hms htmltools htmlwidgets httpuv httr isoband jquerylib jsonlite knitr labeling later lattice lazyeval lifecycle listenv lme4 lmom logger magrittr MASS Matrix MatrixModels memoise mgcv microbenchmark mime minqa modelr munsell mvtnorm nlme nloptr nnet numDeriv officer openssl osprey parallelly pbkrtest pillar pkgconfig plotly prettyunits progress promises proxy purrr quantreg R.cache R.methodsS3 R.oo R.utils R6 ragg rappdirs rbibutils RColorBrewer Rcpp RcppEigen Rdpack readxl rematch renv rlang rlistings rmarkdown rootSolve rprojroot rstudioapi rtables sass scales shiny shinybusy shinycssloaders shinyjs shinyvalidate shinyWidgets sourcetools SparseM stringi stringr styler survival sys systemfonts teal teal.code teal.data teal.logger teal.reporter teal.slice teal.transform teal.widgets tern textshaping tibble tidyr tidyselect tinytex utf8 uuid vctrs viridisLite withr xfun xml2 xtable yaml zip

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
Automatically switch variable labels for standard 'AE' variables in 'AE' osprey functions [Stable]	label_aevar
Helper function to plot decorated output UI	plot_decorate_output
Utility function for quick filter [Stable]	quick_filter
Helper server function to decorate plot output	srv_g_decorate
Teal module for the 'AE' overview	tm_g_ae_oview
teal module for the 'AE' by subgroups	tm_g_ae_sub
Butterfly plot Teal Module	tm_g_butterfly
Events by Term Plot Teal Module	tm_g_events_term_id
Teal module for the heatmap by grade	tm_g_heat_bygrade
Patient Profile plot teal module	tm_g_patient_profile
Spider plot Teal Module	tm_g_spiderplot
Teal Module for 'Swimlane' Plot	tm_g_swimlane
Teal Module for Waterfall Plot	tm_g_waterfall
Helper UI function to decorate plot output UI	ui_g_decorate