Package: teal.data 0.6.0.9010

Dawid Kaledkowski

teal.data: Data Model for 'teal' Applications

Provides a 'teal_data' class as a unified data model for 'teal' applications focusing on reproducibility and relational data.

Authors:Dawid Kaledkowski [aut, cre], Aleksander Chlebowski [aut], Marcin Kosinski [aut], Andre Verissimo [aut], Pawel Rucki [aut], Mahmoud Hallal [aut], Nikolas Burkoff [aut], Maciej Nasinski [aut], Konrad Pagacz [aut], Junlue Zhao [aut], Chendi Liao [rev], Dony Unardi [rev], F. Hoffmann-La Roche AG [cph, fnd]

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teal.data.pdf |teal.data.html
teal.data/json (API)
NEWS

# Install 'teal.data' in R:
install.packages('teal.data', repos = c('https://pharmaverse.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/insightsengineering/teal.data/issues

Datasets:

On CRAN:

data-modelnest

69 exports 8 stars 3.86 score 7 dependencies 8 dependents 39 scripts 1.2k downloads

Last updated 11 days agofrom:6f9fd0f6a3. Checks:OK: 5 NOTE: 2. Indexed: no.

TargetResultDate
Doc / VignettesOKAug 28 2024
R-4.5-winNOTEAug 28 2024
R-4.5-linuxNOTEAug 28 2024
R-4.4-winOKAug 28 2024
R-4.4-macOKAug 28 2024
R-4.3-winOKAug 28 2024
R-4.3-macOKAug 28 2024

Exports:as_cdisccallable_codecallable_functioncdisc_datacdisc_data_connectorcdisc_data_filecdisc_datasetcdisc_dataset_connectorcdisc_dataset_connector_filecdisc_dataset_filecode_cdisc_dataset_connectorcode_dataset_connectorcol_labelscol_labels<-col_relabelcsv_cdisc_dataset_connectorcsv_dataset_connectordata_connectiondatanamesdatanames<-datasetdataset_connectordataset_connector_filedataset_fileexample_cdisc_datafun_cdisc_dataset_connectorfun_dataset_connectorget_attrsget_cdisc_keysget_codeget_datanameget_datasetget_dataset_labelget_datasetsget_join_keysget_join_keys<-get_key_duplicatesget_keysget_labelsget_raw_datais_pulledjoin_keyjoin_keysjoin_keys<-load_datasetload_datasetsmae_datasetmutate_datamutate_datasetparentparentsparents<-python_cdisc_dataset_connectorpython_codepython_dataset_connectorrds_cdisc_dataset_connectorrds_dataset_connectorread_scriptrelational_data_connectorscript_cdisc_dataset_connectorscript_dataset_connectorset_argsset_keysshowteal_datateal_data_fileto_relational_datavalidate_metadataverify

Dependencies:backportscheckmatecligluelifecyclerlangteal.code

Introduction to teal.data

Rendered fromteal-data.Rmdusingknitr::rmarkdownon Aug 28 2024.

Last update: 2024-01-24
Started: 2022-07-22

Join Keys

Rendered fromjoin-keys.Rmdusingknitr::rmarkdownon Aug 28 2024.

Last update: 2024-03-18
Started: 2022-07-29

teal_data reproducibility

Rendered fromteal-data-reproducibility.Rmdusingknitr::rmarkdownon Aug 28 2024.

Last update: 2024-04-08
Started: 2023-12-08

Readme and manuals

Help Manual

Help pageTopics
Data input for 'teal' appcdisc_data
Variable labelscol_labels col_labels<- col_relabel get_labels
Names of data sets in 'teal_data' objectdatanames datanames,qenv.error-method datanames,teal_data-method datanames<- datanames<-,qenv.error,character-method datanames<-,teal_data,character-method
List containing default joining keys for 'CDISC' datasetsdefault_cdisc_join_keys
Generate sample CDISC datasetsexample_cdisc_data
Get code from 'teal_data' objectget_code,teal_data-method
Create a relationship between a pair of datasetsjoin_key
Manage relationships between datasets using 'join_keys'c.join_keys c.join_key_set format.join_keys join_keys join_keys.default join_keys.join_keys join_keys.teal_data join_keys<- join_keys<-.join_keys join_keys<-.teal_data print.join_keys [.join_keys [<-.join_keys
The names of a 'join_keys' objectnames<-.join_keys
Get and set parents in 'join_keys' objectparent parents parents.join_keys parents.teal_data parents<- parents<-.join_keys parents<-.teal_data
Show 'teal_data' objectshow,teal_data-method
Comprehensive data integration function for 'teal' applicationsteal_data
Deprecated 'TealData' class and related functionsas_cdisc callable_code callable_function cdisc_dataset cdisc_dataset_connector cdisc_dataset_connector_file cdisc_dataset_file cdisc_data_connector cdisc_data_file code_cdisc_dataset_connector code_dataset_connector csv_cdisc_dataset_connector csv_dataset_connector dataset dataset_connector dataset_connector_file dataset_file data_connection fun_cdisc_dataset_connector fun_dataset_connector get_attrs get_cdisc_keys get_dataname get_dataset get_datasets get_dataset_label get_join_keys get_join_keys<- get_keys get_key_duplicates get_raw_data is_pulled load_dataset load_datasets mae_dataset mutate_data mutate_dataset python_cdisc_dataset_connector python_code python_dataset_connector rds_cdisc_dataset_connector rds_dataset_connector read_script relational_data_connector script_cdisc_dataset_connector script_dataset_connector set_args set_keys TealData teal_data_file to_relational_data validate_metadata
Verify code reproducibilityverify verify,qenv.error-method verify,teal_data-method