Package: pmxdchk 0.0.0.9000
pmxdchk: Data Visualization and Quality Checking for Pharmacometric Datasets
Data quality checks for NONMEM-style and ADPPK pharmacometric datasets, with a Shiny application to review the findings alongside individual and population concentration-time profiles.
Authors:
pmxdchk_0.0.0.9000.tar.gz
pmxdchk_0.0.0.9000.zip(r-4.7-any)pmxdchk_0.0.0.9000.zip(r-4.6-any)pmxdchk_0.0.0.9000.zip(r-4.5-any)
pmxdchk_0.0.0.9000.tgz(r-4.6-any)pmxdchk_0.0.0.9000.tgz(r-4.5-any)
pmxdchk_0.0.0.9000.tar.gz(r-4.7-any)pmxdchk_0.0.0.9000.tar.gz(r-4.6-any)
pmxdchk_0.0.0.9000.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
pmxdchk/json (API)
| # Install 'pmxdchk' in R: |
| install.packages('pmxdchk', repos = c('https://pharmaverse.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/pharmaverse/pmxdchk/issues
- adppk_corrupted - Example ADPPK dataset with injected data-quality issues
- adppk_example - Example ADPPK dataset
Last updated from:a67c1d8ebd. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel | OK | 146 | ||
| source / vignettes | OK | 203 | ||
| linux-release | OK | 137 | ||
| macos-release | OK | 104 | ||
| macos-oldrel | OK | 103 | ||
| windows-devel | OK | 94 | ||
| windows-release | OK | 81 | ||
| windows-oldrel | OK | 98 | ||
| wasm-release | OK | 117 |
Exports:check_cataloguedefault_thresholdsinfer_study_typerun_apprun_nmpk_checks
Dependencies:attemptbase64encbitbit64bslibcachemclicliprcodetoolscommonmarkconfigcpp11crayoncrosstalkdigestdplyrDTevaluatefarverfastmapfontawesomefsgenericsggplot2gluegolemgtablehighrhmshtmltoolshtmlwidgetshttpuvisobandjquerylibjsonliteknitrlabelinglaterlazyevallifecyclemagrittrmemoisemimeotelpillarpkgconfigprettyunitsprogresspromisespurrrR6rappdirsRColorBrewerRcppreadrrlangrmarkdownS7sassscalesshinysourcetoolstibbletidyselecttinytextzdbutf8vctrsviridisLitevroomwithrxfunxtableyaml
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Example ADPPK dataset with injected data-quality issues | adppk_corrupted |
| Example ADPPK dataset (clean) | adppk_example |
| Catalogue of available checks | check_catalogue |
| Default check thresholds | default_thresholds |
| Infer likely study type(s) from an NMPK dataset | infer_study_type |
| Run the Shiny Application | run_app |
| Run NONMEM dataset quality checks | run_nmpk_checks |
