Package: admiralneuro 0.3.0

Meilin Jiang

admiralneuro: Neuroscience Extension Package for ADaM in 'R' Asset Library

Programming neuroscience specific Clinical Data Standards Interchange Consortium (CDISC) compliant Analysis Data Model (ADaM) datasets in 'R'. ADaM datasets are a mandatory part of any New Drug or Biologics License Application submitted to the United States Food and Drug Administration (FDA). Analysis derivations are implemented in accordance with the "Analysis Data Model Implementation Guide" (CDISC Analysis Data Model Team, 2021, <https://www.cdisc.org/standards/foundational/adam>). This package extends the 'admiral' package.

Authors:Jian Wang [aut], Meilin Jiang [aut, cre], Miles Almond [aut], Xiao Chen [aut], Fanny Gautier [aut], Gayatri G. [aut], Leena Khatri [aut], Edoardo Mancini [aut], Eric Nantz [aut], Lina Patil [aut], Chris Pelentrides [aut], Katie Withycombe [aut], Eli Lilly and Company [cph, fnd], Cytel Inc. [cph, fnd], F. Hoffmann-La Roche AG [cph, fnd]

admiralneuro_0.3.0.tar.gz
admiralneuro_0.3.0.zip(r-4.7-any)admiralneuro_0.3.0.zip(r-4.6-any)admiralneuro_0.3.0.zip(r-4.5-any)
admiralneuro_0.3.0.tgz(r-4.6-any)admiralneuro_0.3.0.tgz(r-4.5-any)
admiralneuro_0.3.0.tar.gz(r-4.7-any)admiralneuro_0.3.0.tar.gz(r-4.6-any)
admiralneuro_0.3.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
admiralneuro/json (API)

# Install 'admiralneuro' in R:
install.packages('admiralneuro', repos = c('https://pharmaverse.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/pharmaverse/admiralneuro/issues

Pkgdown/docs site:https://pharmaverse.github.io

Datasets:

On CRAN:

Conda:

7.16 score 6 stars 9 scripts 443 downloads 2 exports 44 dependencies

Last updated from:e2a68dfcd3. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-develOK143
source / vignettesOK312
linux-releaseOK137
macos-releaseOK102
macos-oldrelOK102
windows-develOK96
windows-releaseOK88
windows-oldrelOK95
wasm-releaseOK105

Exports:compute_centiloidcompute_upsit_percentile

Dependencies:admiraladmiraldevbrewcallrclicommonmarkcpp11descdplyrevaluatefsgenericsgluehighrhmsknitrlifecyclelubridatemagrittrotelpillarpkgbuildpkgconfigpkgloadprocessxpspurrrR6rdtoolsrlangroxygen2rprojrootstringistringrtibbletidyrtidyselecttimechangeutf8vctrswithrxfunxml2yaml

Creating a Neuro ADLB ADaM
Introduction | Required Packages | Programming Workflow | Read in Data | Define Lookup Tables | Derive Core ADLB Variables | Derive Log Transformation of Biomarkers | Remaining ADLB Set-up | Example Script
Rendered fromadlb.Rmdusingknitr::rmarkdown

Last update: 2026-08-14
Started: 2026-08-04

Get Started
Introduction | Creating Neuroscience ADaM Datasets | Support
Rendered fromadmiralneuro.Rmdusingknitr::rmarkdown

Last update: 2026-08-14
Started: 2025-02-27

Creating ADNV
Introduction | Required Packages | Programming Workflow | Read in Data | Initial Setup | Assign PARAMCD, PARAM, and PARAMN variables | Map AVAL and AVALC variables | Convert UPSIT Score to Percentile | Derive Criterion Flag Variables for UPSIT Percentile | Remaining Analysis Dataset Set-up | Example Scripts | References
Rendered fromadnv.Rmdusingknitr::rmarkdown

Last update: 2026-07-08
Started: 2026-01-31

Creating ADTPET and ADAPET
Introduction | Required Packages | Programming Workflow | Read in Data | Initial PET Scan Analysis Dataset Set-up | Create PARAMCD, PARAM, and PARAMN variables | Map AVAL and AVALC variables | ADTPET (Tau PET Scan Analysis Dataset) | ADAPET (Amyloid PET Scan Analysis Dataset) | Convert amyloid SUVR to Centiloid | Derive Criterion Flag Variables for Amyloid Categories | Remaining PET Scan Analysis Dataset Set-up | Example Scripts | References
Rendered fromadpet.Rmdusingknitr::rmarkdown

Last update: 2026-07-08
Started: 2025-08-07