Package: admiralmetabolic 0.3.0.9000

Anders Askeland

admiralmetabolic: Metabolism Extension Package for ADaM in 'R' Asset Library

A toolbox for programming Clinical Data Standards Interchange Consortium (CDISC) compliant Analysis Data Model (ADaM) datasets in R. ADaM datasets are a mandatory part of any New Drug or Biologics License Application submitted to the United States Food and Drug Administration (FDA). Analysis derivations are implemented in accordance with the "Analysis Data Model Implementation Guide" (CDISC Analysis Data Model Team, 2021, <https://www.cdisc.org/standards/foundational/adam>). The package is an extension package of the 'admiral' package focusing on the metabolism therapeutic area.

Authors:Anders Askeland [aut, cre], Andrii Yurovskyi [aut], Kathrin Flunkert [aut], Edoardo Mancini [aut], Shunsuke Goto [aut], Siddhesh Pujari [aut], Sonali Das [aut], Olga Starostecka [aut], Vang Le-Quy [aut], Keita Takahashi [aut]

admiralmetabolic_0.3.0.9000.tar.gz
admiralmetabolic_0.3.0.9000.zip(r-4.7-any)admiralmetabolic_0.3.0.9000.zip(r-4.6-any)admiralmetabolic_0.3.0.9000.zip(r-4.5-any)
admiralmetabolic_0.3.0.9000.tgz(r-4.6-any)admiralmetabolic_0.3.0.9000.tgz(r-4.5-any)
admiralmetabolic_0.3.0.9000.tar.gz(r-4.7-any)admiralmetabolic_0.3.0.9000.tar.gz(r-4.6-any)
admiralmetabolic_0.3.0.9000.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
admiralmetabolic/json (API)

# Install 'admiralmetabolic' in R:
install.packages('admiralmetabolic', repos = c('https://pharmaverse.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/pharmaverse/admiralmetabolic/issues

Pkgdown/docs site:https://pharmaverse.github.io

Datasets:

On CRAN:

Conda:

6.97 score 10 stars 14 scripts 453 downloads 2 exports 44 dependencies

Last updated from:96138c5391. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-develOK211
source / vignettesOK238
linux-releaseOK166
macos-releaseOK117
macos-oldrelOK102
windows-develOK114
windows-releaseOK97
windows-oldrelOK81
wasm-releaseOK112

Exports:derive_param_waisthgtderive_param_waisthip

Dependencies:admiraladmiraldevbrewcallrclicommonmarkcpp11descdplyrevaluatefsgenericsgluehighrhmsknitrlifecyclelubridatemagrittrotelpillarpkgbuildpkgconfigpkgloadprocessxpspurrrR6rdtoolsrlangroxygen2rprojrootstringistringrtibbletidyrtidyselecttimechangeutf8vctrswithrxfunxml2yaml

Get Started
Introduction | Derivations | Creating ADaM Datasets | Support
Rendered fromadmiralmetabolic.Rmdusingknitr::rmarkdown

Last update: 2026-02-03
Started: 2024-06-17

Creating a Control of Eating Questionnaire ADaM
License | Introduction | Required Packages | Programming Workflow | Read in Data | Derive Core ADVS Variables | Original Items | Derive the four Subscales | Remaining ADCOEQ Set-up | Example Scripts
Rendered fromadcoeq.Rmdusingknitr::rmarkdown

Last update: 2025-07-16
Started: 2024-11-29

Creating a Metabolic ADVS ADaM
Introduction | Required Packages | Programming Workflow | Read in Data | Derive Core ADVS Variables | Create PARAMCD, PARAM, PARAMN, PARCAT1 variables | Derive Parameters for Metabolic indicators | Derive BMI | Derive waist hip-ratio | Derive Variables for Metabolic indicators | Derive Categorization Variables (AVALCATy, BASECATy) | Derive Criterion Variables (CRITy, CRITyFL, CRITyFN) | Remaining ADVS Set-up | Example Scripts
Rendered fromadvs.Rmdusingknitr::rmarkdown

Last update: 2025-07-16
Started: 2024-09-20

Creating a Metabolic ADLB ADaM
Introduction | Required Packages | Programming Workflow | Read in Data | Define Lookup Tables | Derive Core ADLB Variables | Derive Visit Information | Derive Metabolic Parameters | Add variables required for derivation | Derive HOMA-IR index | Derive FLI score | Remaining ADLB Set-up | Example Scripts
Rendered fromadlb.Rmdusingknitr::rmarkdown

Last update: 2025-07-11
Started: 2025-06-30