Package: CTP 3.0.2

Paul Jordan

CTP: Closed Testing Procedure (CTP)

This is a package for constructing hypothesis trees for treatment comparisons based on the closure principle and analysing the corresponding Closed Testing Procedures (CTP) using adjusted p-values. For reference, see Marcus, R., Peritz, E, and Gabriel, K.R. (1976) <doi:10.2307/2335748> and Bauer, P (1991) <doi:10.1002/sim.4780100609>.

Authors:Paul Jordan [aut, cre], Matthias Herpers [aut]

CTP_3.0.2.tar.gz
CTP_3.0.2.zip(r-4.5)CTP_3.0.2.zip(r-4.4)CTP_3.0.2.zip(r-4.3)
CTP_3.0.2.tgz(r-4.4-any)CTP_3.0.2.tgz(r-4.3-any)
CTP_3.0.2.tar.gz(r-4.5-noble)CTP_3.0.2.tar.gz(r-4.4-noble)
CTP_3.0.2.tgz(r-4.4-emscripten)CTP_3.0.2.tgz(r-4.3-emscripten)
CTP.pdf |CTP.html✨
CTP/json (API)
NEWS

# Install 'CTP' in R:

install.packages('CTP', repos = c('https://pharmaverse.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/openpharma/ctp/issues

Datasets:

colorectal - Data from a Study in Colorectal Cancer
glucose - Data from a study in Diabetes II patients
pasi - Data from a Psoriasis study

On CRAN:

3.00 score 1 stars 3 scripts 40 downloads 30 mentions 7 exports 84 dependencies

Last updated 2 years agofrom:eee4ac1a7e. Checks:ERROR: 1 WARNING: 6. Indexed: no.

Target	Result	Date
Doc / Vignettes	FAIL	Nov 02 2024
R-4.5-win	WARNING	Nov 02 2024
R-4.5-linux	WARNING	Nov 02 2024
R-4.4-win	WARNING	Nov 02 2024
R-4.4-mac	WARNING	Nov 02 2024
R-4.3-win	WARNING	Nov 02 2024
R-4.3-mac	WARNING	Nov 02 2024

Exports:Adjust_p Adjust_raw AnalyseCTP Display getResponse IntersectHypotheses TestingSet

Dependencies:abind backports base64enc bslib cachem checkmate cli clinfun cluster colorspace cpp11 data.table diagram digest dplyr emmeans estimability evaluate fansi farver fastmap fontawesome foreign forestplot Formula fs generics ggplot2 glue Gmisc gridExtra gtable highr Hmisc htmlTable htmltools htmlwidgets isoband jquerylib jsonlite knitr labeling lattice lifecycle lubridate magrittr MASS Matrix memoise mgcv mime munsell mvtnorm nlme nnet numDeriv pillar pkgconfig R6 rappdirs RColorBrewer Rcpp rlang rmarkdown rpart rstudioapi sass scales shape stringi stringr survival tibble tidyselect timechange tinytex utf8 vctrs viridis viridisLite withr xfun XML yaml

Vignettes and/or manual for this package failed to build, some documents may be unavailable. Please inspect thebuild logs for more information.

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
Adjusting p-values, auxiliary function	Adjust_p
Adjusting raw p-values of a CTP	Adjust_raw
Analysing a Closed Testing Procedure	AnalyseCTP
Data from a Study in Colorectal Cancer	colorectal
CTP, a package for closed testing procedures	CTP
Comparisons of treatment levels	CTPcompare
Auxiliary function	getCTPparms
Auxiliary function	getResponse
Data from a study in Diabetes II patients	glucose
Intersection of hypotheses	IntersectHypotheses
Data from a Psoriasis study	pasi
Summarising and plotting the results of hypothesis trees and closed testing procedures	Display Display.ctp Display.ctp.str summary.ctp summary.ctp.str
Testing set for an elementary hypothesis	TestingSet